CDS

Accession Number TCMCG017C21959
gbkey CDS
Protein Id OMO80047.1
Location complement(join(11802..11852,11914..12081,12478..12686,12874..12965,13052..14133,14611..14634))
GeneID InterPro:IPR000270
Organism Corchorus olitorius
locus_tag COLO4_24272

Protein

Length 541aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01018466.1
Definition Phox/Bem1p [Corchorus olitorius]
Locus_tag COLO4_24272

EGGNOG-MAPPER Annotation

COG_category S
Description Ig-like domain from next to BRCA1 gene
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K17987        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04137        [VIEW IN KEGG]
map04137        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005770        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006914        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016236        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032182        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0043130        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0051258        [VIEW IN EMBL-EBI]
GO:0051259        [VIEW IN EMBL-EBI]
GO:0061919        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATTCAGCTCTAGTTATCAAGGTCAAATATGGTGATACACTTAGGCGCTTTACTGCATATCCTGATGAAACTGGTCTCCTGGATCTTGACATGAACTTGCTAAAACAGAAGATTCATAGTATGTTTAACTTTGCTTCTGATGCCAACCTCACCCTGGTTTATATTGATGAAGATGGTGATATGGTAACACTTGTTGATGATGAGGATTTATGTGAAGCCATTAGCCAAGATTTGAATCCCCTCAGAATAAATGTGTCATTGAACAATACAAGAGCCAAAAGATCCAAGTTTAGGTTAAAAATAAGTTGTAGTTGTAGAAGATCATGTCATGTCAGATGTCCACTGTCTCCAACTGATTCTGGTGATTTTGAAAGACCTTTGAAGTTTTTATCTGATCCTATTTTAGAAGCTTTTCATAAGATCTACGTGGAATTAATAGCAAAGGCTATTTCTATAGTATTAATGAAATTTGTGGACTATTTATCTAAGTTAGAATCATCCCTCCAAGGCTCTCTTTTAGAATGTAAGGAAGGTAAACACAATGGGGAGGGATTCACTTCTGAATGTCCAAATGATTCTAAAGTGACTGAGGATTCACAGTTCAGTAATGGCATAGTTAAACAGAAGCCATTGCCAACAGAGGAAATTGAAGACTCAATGCAAAAAGACTTTCACCAGGGAAAGGAACCTGAGAATGTGACAACCGCCTTGAAAAATTCTTTTCCACAATATACTCCTGGATTTGTTGTTAACAATGATCTTCAAGTAGATTCTGCTGCATCGGAATTGTCAAGTTTAAATGGAAATTCGTGGGTTTGTCCGTCTGATGCAGTGTGCAATCAGAACAATAACAAGGCCAAGGAAGAAGAATGTGCTCAGAATAGTGGGAATTGTACTAATTCTGATTGTTCTGCATATCTTGCTTATCCTTTTATTACCATTCAAGATTCTAGGTCATCACGAATTGATTCTAAGCCCTGTGAATCTTCATCAAAGAAGATCAGCTATTCTGGAAATACCATTTATAGAGTATTTCACAAAGGAATCAGATGTGATGGTTGTGGAATGCATCCTATAGTAGGGCCTCGTTTCAAATCAACAGTAAAAGAGGATTATGATCTATGCAACATTTGCTTTTCAGACATGGGAACTATGAATGAATATATCAGATTAGACCATCCTGTCCCAGTTCCACATGGTGCTAGAAAGCCACATCTGCTGATGTTTGACAGCATTTTAGTTAAAGATGTTAGCATCATGCATGACACTTGCATATCCCCAAATGTTCCTTGTATCAAGATATGGAAAATGCTGAACGTTGGAACGGCTCCTTGGCCGTGTGGCACACATCTCGTATGGACTGGAGGGTATCAGTTTGCTAATCAAGCTGCCGTTGGACTTAAGATTCCCCGAGATGGCTTCCCTGTAGGCAAGAACCTTGATGTTGCTTTTACTTTTACAACACCTATGAAGCCTGGTCAGCACGTTTCATACTGGCGGATGTCACTGCCTTCAGGAGAGCAATTTGGGGAGTATTTAACTATCTTCGTAAAGGTTTCGACAAGCACTCTGGTAGATGCTTCCATGAGTCTTCAACCAATATCCCCAATGATATCAATCTGA
Protein:  
MDSALVIKVKYGDTLRRFTAYPDETGLLDLDMNLLKQKIHSMFNFASDANLTLVYIDEDGDMVTLVDDEDLCEAISQDLNPLRINVSLNNTRAKRSKFRLKISCSCRRSCHVRCPLSPTDSGDFERPLKFLSDPILEAFHKIYVELIAKAISIVLMKFVDYLSKLESSLQGSLLECKEGKHNGEGFTSECPNDSKVTEDSQFSNGIVKQKPLPTEEIEDSMQKDFHQGKEPENVTTALKNSFPQYTPGFVVNNDLQVDSAASELSSLNGNSWVCPSDAVCNQNNNKAKEEECAQNSGNCTNSDCSAYLAYPFITIQDSRSSRIDSKPCESSSKKISYSGNTIYRVFHKGIRCDGCGMHPIVGPRFKSTVKEDYDLCNICFSDMGTMNEYIRLDHPVPVPHGARKPHLLMFDSILVKDVSIMHDTCISPNVPCIKIWKMLNVGTAPWPCGTHLVWTGGYQFANQAAVGLKIPRDGFPVGKNLDVAFTFTTPMKPGQHVSYWRMSLPSGEQFGEYLTIFVKVSTSTLVDASMSLQPISPMISI